Search Results for author: Tanveer Syeda-Mahmood

Found 31 papers, 6 papers with code

Improving Neural Models for Radiology Report Retrieval with Lexicon-based Automated Annotation

no code implementations NAACL 2022 Luyao Shi, Tanveer Syeda-Mahmood, Tyler Baldwin

However, these methods still lack semantic understanding of the underlying clinical conditions as well as ruled out findings, resulting in poor precision during retrieval.

Information Retrieval Retrieval +1

Multimodal Machine Learning in Image-Based and Clinical Biomedicine: Survey and Prospects

no code implementations4 Nov 2023 Elisa Warner, Joonsang Lee, William Hsu, Tanveer Syeda-Mahmood, Charles Kahn, Olivier Gevaert, Arvind Rao

Machine learning (ML) applications in medical artificial intelligence (AI) systems have shifted from traditional and statistical methods to increasing application of deep learning models.

Data Integration Translation

HartleyMHA: Self-Attention in Frequency Domain for Resolution-Robust and Parameter-Efficient 3D Image Segmentation

1 code implementation5 Oct 2023 Ken C. L. Wong, Hongzhi Wang, Tanveer Syeda-Mahmood

With the introduction of Transformers, different attention-based models have been proposed for image segmentation with promising results.

Image Segmentation Semantic Segmentation +1

FNOSeg3D: Resolution-Robust 3D Image Segmentation with Fourier Neural Operator

1 code implementation5 Oct 2023 Ken C. L. Wong, Hongzhi Wang, Tanveer Syeda-Mahmood

Due to the computational complexity of 3D medical image segmentation, training with downsampled images is a common remedy for out-of-memory errors in deep learning.

Image Segmentation Medical Image Segmentation +2

MaxCorrMGNN: A Multi-Graph Neural Network Framework for Generalized Multimodal Fusion of Medical Data for Outcome Prediction

no code implementations13 Jul 2023 Niharika S. D'Souza, Hongzhi Wang, Andrea Giovannini, Antonio Foncubierta-Rodriguez, Kristen L. Beck, Orest Boyko, Tanveer Syeda-Mahmood

With the emergence of multimodal electronic health records, the evidence for an outcome may be captured across multiple modalities ranging from clinical to imaging and genomic data.

Towards Automatic Prediction of Outcome in Treatment of Cerebral Aneurysms

no code implementations18 Nov 2022 Ashutosh Jadhav, Satyananda Kashyap, Hakan Bulu, Ronak Dholakia, Amon Y. Liu, Tanveer Syeda-Mahmood, William R. Patterson, Hussain Rangwala, Mehdi Moradi

Residual flow into the sac after the intervention is a failure that could be due to the use of an undersized device, or to vascular anatomy and clinical condition of the patient.

Anatomy

Spatially-Preserving Flattening for Location-Aware Classification of Findings in Chest X-Rays

no code implementations19 Apr 2022 Neha Srivathsa, Razi Mahmood, Tanveer Syeda-Mahmood

In this paper, we present a new spatially preserving deep learning network that preserves location and shape information through auto-encoding of feature maps during flattening.

Anomaly Classification Classification

Addressing Deep Learning Model Uncertainty in Long-Range Climate Forecasting with Late Fusion

no code implementations10 Dec 2021 Ken C. L. Wong, Hongzhi Wang, Etienne E. Vos, Bianca Zadrozny, Campbell D. Watson, Tanveer Syeda-Mahmood

Global warming leads to the increase in frequency and intensity of climate extremes that cause tremendous loss of lives and property.

Management

Multi-modality fusion using canonical correlation analysis methods: Application in breast cancer survival prediction from histology and genomics

1 code implementation27 Nov 2021 Vaishnavi Subramanian, Tanveer Syeda-Mahmood, Minh N. Do

We propose a two-stage prediction pipeline using pCCA embeddings generated with deflation for latent variable prediction by combining all the above.

Survival Prediction

Multimodal fusion using sparse CCA for breast cancer survival prediction

1 code implementation9 Mar 2021 Vaishnavi Subramanian, Tanveer Syeda-Mahmood, Minh N. Do

Effective understanding of a disease such as cancer requires fusing multiple sources of information captured across physical scales by multimodal data.

Survival Prediction

Extracting and Learning Fine-Grained Labels from Chest Radiographs

no code implementations18 Nov 2020 Tanveer Syeda-Mahmood, K. C. L Wong, Joy T. Wu, M. D., M. P. H, Ashutosh Jadhav, Ph. D, Orest Boyko, M. D. Ph. D

Chest radiographs are the most common diagnostic exam in emergency rooms and intensive care units today.

Receptivity of an AI Cognitive Assistant by the Radiology Community: A Report on Data Collected at RSNA

no code implementations13 Sep 2020 Karina Kanjaria, Anup Pillai, Chaitanya Shivade, Marina Bendersky, Ashutosh Jadhav, Vandana Mukherjee, Tanveer Syeda-Mahmood

Due to advances in machine learning and artificial intelligence (AI), a new role is emerging for machines as intelligent assistants to radiologists in their clinical workflows.

Multiple-choice Question Answering

Chest X-ray Report Generation through Fine-Grained Label Learning

no code implementations27 Jul 2020 Tanveer Syeda-Mahmood, Ken C. L. Wong, Yaniv Gur, Joy T. Wu, Ashutosh Jadhav, Satyananda Kashyap, Alexandros Karargyris, Anup Pillai, Arjun Sharma, Ali Bin Syed, Orest Boyko, Mehdi Moradi

Obtaining automated preliminary read reports for common exams such as chest X-rays will expedite clinical workflows and improve operational efficiencies in hospitals.

Boosting the rule-out accuracy of deep disease detection using class weight modifiers

no code implementations21 Jun 2019 Alexandros Karargyris, Ken C. L. Wong, Joy T. Wu, Mehdi Moradi, Tanveer Syeda-Mahmood

We experiment with two different deep neural network architectures and show that the proposed method results in a large improvement in the performance of the classifiers, specially on negated findings.

Identifying disease-free chest X-ray images with deep transfer learning

no code implementations2 Apr 2019 Ken C. L. Wong, Mehdi Moradi, Joy Wu, Tanveer Syeda-Mahmood

In this work, we report a deep neural network trained for classifying CXRs with the goal of identifying a large number of normal (disease-free) images without risking the discharge of sick patients.

Transfer Learning

Age prediction using a large chest X-ray dataset

no code implementations9 Mar 2019 Alexandros Karargyris, Satyananda Kashyap, Joy T. Wu, Arjun Sharma, Mehdi Moradi, Tanveer Syeda-Mahmood

Age prediction based on appearances of different anatomies in medical images has been clinically explored for many decades.

Bimodal network architectures for automatic generation of image annotation from text

no code implementations5 Sep 2018 Mehdi Moradi, Ali Madani, Yaniv Gur, Yufan Guo, Tanveer Syeda-Mahmood

The source of big data is typically large image collections and clinical reports recorded for these images.

3D Segmentation with Exponential Logarithmic Loss for Highly Unbalanced Object Sizes

1 code implementation31 Aug 2018 Ken C. L. Wong, Mehdi Moradi, Hui Tang, Tanveer Syeda-Mahmood

In this paper, we propose a network architecture and the corresponding loss function which improve segmentation of very small structures.

Brain Segmentation Image Segmentation +2

Building medical image classifiers with very limited data using segmentation networks

no code implementations15 Aug 2018 Ken C. L. Wong, Tanveer Syeda-Mahmood, Mehdi Moradi

Deep learning has shown promising results in medical image analysis, however, the lack of very large annotated datasets confines its full potential.

Classification General Classification +1

Building Disease Detection Algorithms with Very Small Numbers of Positive Samples

no code implementations7 May 2018 Ken C. L. Wong, Alexandros Karargyris, Tanveer Syeda-Mahmood, Mehdi Moradi

We train a discriminative segmentation model only on normal images to provide a source of knowledge to be transferred to a disease detection classifier.

Anatomy Classification +2

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