Search Results for author: Karin Stacke

Found 5 papers, 2 papers with code

Correlated Feature Aggregation by Region Helps Distinguish Aggressive from Indolent Clear Cell Renal Cell Carcinoma Subtypes on CT

no code implementations29 Sep 2022 Karin Stacke, Indrani Bhattacharya, Justin R. Tse, James D. Brooks, Geoffrey A. Sonn, Mirabela Rusu

CorrFABR consists of three main steps: (1) Feature Aggregation where region-level features are extracted from radiology and pathology images, (2) Fusion where radiology features correlated with pathology features are learned on a region level, and (3) Prediction where the learned correlated features are used to distinguish aggressive from indolent clear cell RCC using CT alone as input.

Binary Classification

Learning Representations with Contrastive Self-Supervised Learning for Histopathology Applications

1 code implementation10 Dec 2021 Karin Stacke, Jonas Unger, Claes Lundström, Gabriel Eilertsen

We bring forward a number of considerations, such as view generation for the contrastive objective and hyper-parameter tuning.

Benchmarking Contrastive Learning +1

Primary Tumor and Inter-Organ Augmentations for Supervised Lymph Node Colon Adenocarcinoma Metastasis Detection

no code implementations17 Sep 2021 Apostolia Tsirikoglou, Karin Stacke, Gabriel Eilertsen, Jonas Unger

The scarcity of labeled data is a major bottleneck for developing accurate and robust deep learning-based models for histopathology applications.

Data Augmentation

A Study of Deep Learning Colon Cancer Detection in Limited Data Access Scenarios

no code implementations20 May 2020 Apostolia Tsirikoglou, Karin Stacke, Gabriel Eilertsen, Martin Lindvall, Jonas Unger

One such scenario relates to detecting tumor metastasis in lymph node tissue, where the low ratio of tumor to non-tumor cells makes the diagnostic task hard and time-consuming.

A Closer Look at Domain Shift for Deep Learning in Histopathology

1 code implementation25 Sep 2019 Karin Stacke, Gabriel Eilertsen, Jonas Unger, Claes Lundström

Most centrally, we present a novel measure for evaluating the distance between domains in the context of the learned representation of a particular model.

General Classification whole slide images

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