1 code implementation • Second Workshop on Machine Learning and the Physical Sciences (NeurIPS 2019) 2019 • Joseph Gomes, Keri A. McKiernan, Peter Eastman, Vijay S. Pande
The classical simulation of quantum systems typically requires exponential resources.
Disordered Systems and Neural Networks Strongly Correlated Electrons Quantum Physics
10 code implementations • ICLR 2020 • Weihua Hu, Bowen Liu, Joseph Gomes, Marinka Zitnik, Percy Liang, Vijay Pande, Jure Leskovec
Many applications of machine learning require a model to make accurate pre-dictions on test examples that are distributionally different from training ones, while task-specific labels are scarce during training.
Ranked #3 on Molecular Property Prediction on ToxCast
no code implementations • 23 Mar 2018 • Amir Barati Farimani, Joseph Gomes, Rishi Sharma, Franklin L. Lee, Vijay S. Pande
Phase segregation, the process by which the components of a binary mixture spontaneously separate, is a key process in the evolution and design of many chemical, mechanical, and biological systems.
no code implementations • 7 Sep 2017 • Amir Barati Farimani, Joseph Gomes, Vijay S. Pande
We have developed a new data-driven paradigm for the rapid inference, modeling and simulation of the physics of transport phenomena by deep learning.
no code implementations • 6 Jun 2017 • Bowen Liu, Bharath Ramsundar, Prasad Kawthekar, Jade Shi, Joseph Gomes, Quang Luu Nguyen, Stephen Ho, Jack Sloane, Paul Wender, Vijay Pande
We describe a fully data driven model that learns to perform a retrosynthetic reaction prediction task, which is treated as a sequence-to-sequence mapping problem.
3 code implementations • 30 Mar 2017 • Joseph Gomes, Bharath Ramsundar, Evan N. Feinberg, Vijay S. Pande
The atomic convolutional neural network is trained to predict the experimentally determined binding affinity of a protein-ligand complex by direct calculation of the energy associated with the complex, protein, and ligand given the crystal structure of the binding pose.
5 code implementations • 2 Mar 2017 • Zhenqin Wu, Bharath Ramsundar, Evan N. Feinberg, Joseph Gomes, Caleb Geniesse, Aneesh S. Pappu, Karl Leswing, Vijay Pande
However, algorithmic progress has been limited due to the lack of a standard benchmark to compare the efficacy of proposed methods; most new algorithms are benchmarked on different datasets making it challenging to gauge the quality of proposed methods.