1 code implementation • 13 Jul 2023 • Marzieh Oghbaie, Teresa Araujo, Taha Emre, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Consequently, the accumulated positional information in each positional embedding can be generalized to the neighbouring slices, even for high-resolution volumes at the test time.
no code implementations • 8 Nov 2022 • Dmitrii Lachinov, Arunava Chakravarty, Christoph Grechenig, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Our method represents a time-invariant physical process and solves a large-scale problem of modeling temporal pixel-level changes utilizing NeuralODEs.
no code implementations • 26 Oct 2022 • Botond Fazekas, Dmitrii Lachinov, Guilherme Aresta, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Bruch's membrane (BM) segmentation on optical coherence tomography (OCT) is a pivotal step for the diagnosis and follow-up of age-related macular degeneration (AMD), one of the leading causes of blindness in the developed world.
1 code implementation • 1 Jul 2022 • Botond Fazekas, Guilherme Aresta, Dmitrii Lachinov, Sophie Riedl, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
Optical coherence tomography (OCT) is a non-invasive 3D modality widely used in ophthalmology for imaging the retina.
no code implementations • 25 Feb 2022 • Teresa Araújo, Guilherme Aresta, Hrvoje Bogunovic
The development of automatic tools for early glaucoma diagnosis with color fundus photographs can significantly reduce the impact of this disease.
no code implementations • 14 Feb 2022 • Junde Wu, Huihui Fang, Fei Li, Huazhu Fu, Fengbin Lin, Jiongcheng Li, Lexing Huang, Qinji Yu, Sifan Song, Xinxing Xu, Yanyu Xu, Wensai Wang, Lingxiao Wang, Shuai Lu, Huiqi Li, Shihua Huang, Zhichao Lu, Chubin Ou, Xifei Wei, Bingyuan Liu, Riadh Kobbi, Xiaoying Tang, Li Lin, Qiang Zhou, Qiang Hu, Hrvoje Bogunovic, José Ignacio Orlando, Xiulan Zhang, Yanwu Xu
However, although numerous algorithms are proposed based on fundus images or OCT volumes in computer-aided diagnosis, there are still few methods leveraging both of the modalities for the glaucoma assessment.
no code implementations • 2 Aug 2021 • Dmitrii Lachinov, Philipp Seeboeck, Julia Mai, Ursula Schmidt-Erfurth, Hrvoje Bogunovic
In medical imaging, there are clinically relevant segmentation tasks where the output mask is a projection to a subset of input image dimensions.
no code implementations • 5 May 2020 • Huazhu Fu, Fei Li, Xu sun, Xingxing Cao, Jingan Liao, Jose Ignacio Orlando, Xing Tao, Yuexiang Li, Shihao Zhang, Mingkui Tan, Chenglang Yuan, Cheng Bian, Ruitao Xie, Jiongcheng Li, Xiaomeng Li, Jing Wang, Le Geng, Panming Li, Huaying Hao, Jiang Liu, Yan Kong, Yongyong Ren, Hrvoje Bogunovic, Xiulan Zhang, Yanwu Xu
To address this, we organized the Angle closure Glaucoma Evaluation challenge (AGE), held in conjunction with MICCAI 2019.
no code implementations • 31 Oct 2018 • Philipp Seeböck, Sebastian M. Waldstein, Sophie Klimscha, Hrvoje Bogunovic, Thomas Schlegl, Bianca S. Gerendas, René Donner, Ursula Schmidt-Erfurth, Georg Langs
A multi-scale deep denoising autoencoder is trained on healthy images, and a one-class support vector machine identifies anomalies in new data.
no code implementations • 6 Jun 2018 • Lena Maier-Hein, Matthias Eisenmann, Annika Reinke, Sinan Onogur, Marko Stankovic, Patrick Scholz, Tal Arbel, Hrvoje Bogunovic, Andrew P. Bradley, Aaron Carass, Carolin Feldmann, Alejandro F. Frangi, Peter M. Full, Bram van Ginneken, Allan Hanbury, Katrin Honauer, Michal Kozubek, Bennett A. Landman, Keno März, Oskar Maier, Klaus Maier-Hein, Bjoern H. Menze, Henning Müller, Peter F. Neher, Wiro Niessen, Nasir Rajpoot, Gregory C. Sharp, Korsuk Sirinukunwattana, Stefanie Speidel, Christian Stock, Danail Stoyanov, Abdel Aziz Taha, Fons van der Sommen, Ching-Wei Wang, Marc-André Weber, Guoyan Zheng, Pierre Jannin, Annette Kopp-Schneider
International challenges have become the standard for validation of biomedical image analysis methods.
no code implementations • 8 May 2018 • Thomas Schlegl, Hrvoje Bogunovic, Sophie Klimscha, Philipp Seeböck, Amir Sadeghipour, Bianca Gerendas, Sebastian M. Waldstein, Georg Langs, Ursula Schmidt-Erfurth
The automatic detection of disease related entities in retinal imaging data is relevant for disease- and treatment monitoring.