Random-effects substitution models for phylogenetics via scalable gradient approximations

1 code implementation • 23 Mar 2023 • Andrew F. Magee, Andrew J. Holbrook, Jonathan E. Pekar, Itzue W. Caviedes-Solis, Fredrick A. Matsen IV, Guy Baele, Joel O. Wertheim, Xiang Ji, Philippe Lemey, Marc A. Suchard

Phylogenetic and discrete-trait evolutionary inference depend heavily on an appropriate characterization of the underlying character substitution process.

Bayesian Inference