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Found 3 papers, 3 papers with code
Random-effects substitution models for phylogenetics via scalable gradient approximations
Phylogenetic and discrete-trait evolutionary inference depend heavily on an appropriate characterization of the underlying character substitution process.
19 dubious ways to compute the marginal likelihood of a phylogenetic tree topology
The marginal likelihood of a model is a key quantity for assessing the evidence provided by the data in support of a model.
Locally-adaptive Bayesian nonparametric inference for phylodynamics
We also use our models to reconstruct past changes in genetic diversity of human hepatitis C virus in Egypt and to estimate population size changes of ancient and modern steppe bison.
Methodology Populations and Evolution
