1 code implementation • 9 Jun 2023 • Matthew J Penn, Neil Scheidwasser, Joseph Penn, Christl A Donnelly, David A Duchêne, Samir Bhatt
Phylogenetics is now fundamental in life sciences, providing insights into the earliest branches of life and the origins and spread of epidemics.
1 code implementation • 25 Apr 2023 • Matthew J Penn, Neil Scheidwasser, Mark P Khurana, David A Duchêne, Christl A Donnelly, Samir Bhatt
Yet, these heuristics often lack a systematic means of uniformly sampling random trees or effectively exploring a tree space that grows factorially, which are crucial to optimisation problems such as machine learning.
no code implementations • 21 Jun 2020 • Robin N Thompson, T Deirdre Hollingsworth, Valerie Isham, Daniel Arribas-Bel, Ben Ashby, Tom Britton, Peter Challoner, Lauren H K Chappell, Hannah Clapham, Nik J Cunniffe, A Philip Dawid, Christl A Donnelly, Rosalind Eggo, Sebastian Funk, Nigel Gilbert, Julia R Gog, Paul Glendinning, William S Hart, Hans Heesterbeek, Thomas House, Matt Keeling, Istvan Z Kiss, Mirjam Kretzschmar, Alun L Lloyd, Emma S McBryde, James M McCaw, Joel C Miller, Trevelyan J McKinley, Martina Morris, Philip D ONeill, Carl A B Pearson, Kris V Parag, Lorenzo Pellis, Juliet R C Pulliam, Joshua V Ross, Michael J Tildesley, Gianpaolo Scalia Tomba, Bernard W Silverman, Claudio J Struchiner, Pieter Trapman, Cerian R Webb, Denis Mollison, Olivier Restif
Combinations of intense non-pharmaceutical interventions ('lockdowns') were introduced in countries worldwide to reduce SARS-CoV-2 transmission.