Search Results for author: Zachary M. C. Baum

Found 10 papers, 5 papers with code

Non-rigid Medical Image Registration using Physics-informed Neural Networks

1 code implementation20 Feb 2023 Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu

Biomechanical modelling of soft tissue provides a non-data-driven method for constraining medical image registration, such that the estimated spatial transformation is considered biophysically plausible.

Image Registration Medical Image Registration

Image quality assessment by overlapping task-specific and task-agnostic measures: application to prostate multiparametric MR images for cancer segmentation

1 code implementation20 Feb 2022 Shaheer U. Saeed, Wen Yan, Yunguan Fu, Francesco Giganti, Qianye Yang, Zachary M. C. Baum, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Mark Emberton, Dean C. Barratt, Yipeng Hu

This allows for the trained IQA controller to measure the impact an image has on the target task performance, when this task is performed using the predictor, e. g. segmentation and classification neural networks in modern clinical applications.

Image Quality Assessment

Adaptable image quality assessment using meta-reinforcement learning of task amenability

1 code implementation31 Jul 2021 Shaheer U. Saeed, Yunguan Fu, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, J. Alison Noble, Dean C. Barratt, Yipeng Hu

Using 6644 clinical ultrasound images from 249 prostate cancer patients, our results for image classification and segmentation tasks show that the proposed IQA method can be adapted using data with as few as respective 19. 7% and 29. 6% expert-reviewed consensus labels and still achieve comparable IQA and task performance, which would otherwise require a training dataset with 100% expert labels.

Image Classification Image Quality Assessment +4

Learning image quality assessment by reinforcing task amenable data selection

no code implementations15 Feb 2021 Shaheer U. Saeed, Yunguan Fu, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Dean C. Barratt, Yipeng Hu

In this paper, we consider a type of image quality assessment as a task-specific measurement, which can be used to select images that are more amenable to a given target task, such as image classification or segmentation.

Image Classification Image Quality Assessment

Multimodality Biomedical Image Registration using Free Point Transformer Networks

no code implementations5 Aug 2020 Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt

We describe a point-set registration algorithm based on a novel free point transformer (FPT) network, designed for points extracted from multimodal biomedical images for registration tasks, such as those frequently encountered in ultrasound-guided interventional procedures.

Image Registration

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