Search Results for author: Xuechun Xu

Found 2 papers, 1 papers with code

Modelling the nanopore sequencing process with Helicase HMMs

no code implementations1 May 2024 Xuechun Xu, Joakim Jaldén

Recent advancements in nanopore sequencing technology, particularly the R10 nanopore from Oxford Nanopore Technology, have necessitated the development of improved data processing methods to utilize their potential for more than 9-mer resolution fully.

Marginalized Beam Search Algorithms for Hierarchical HMMs

1 code implementation19 May 2023 Xuechun Xu, Joakim Jaldén

Inferring a state sequence from a sequence of measurements is a fundamental problem in bioinformatics and natural language processing.

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