Search Results for author: Wajid Arshad Abbasi

Found 5 papers, 2 papers with code

COVIDX: Computer-aided diagnosis of Covid-19 and its severity prediction with raw digital chest X-ray images

1 code implementation25 Dec 2020 Wajid Arshad Abbasi, Syed Ali Abbas, Saiqa Andleeb

In the absence of specific drugs or vaccines for the treatment of COVID-19 and the limitation of prevailing diagnostic techniques, there is a requirement for some alternate automatic screening systems that can be used by the physicians to quickly identify and isolate the infected patients.

severity prediction

PANDA: Predicting the change in proteins binding affinity upon mutations using sequence information

1 code implementation16 Sep 2020 Wajid Arshad Abbasi, Syed Ali Abbas, Saiqa Andleeb

Accurately determining a change in protein binding affinity upon mutations is important for the discovery and design of novel therapeutics and to assist mutagenesis studies.

Anomaly Detection

ISLAND: In-Silico Prediction of Proteins Binding Affinity Using Sequence Descriptors

no code implementations22 Nov 2017 Wajid Arshad Abbasi, Fahad Ul Hassan, Adiba Yaseen, Fayyaz ul Amir Afsar Minhas

Determination of binding affinity of proteins in the formation of protein complexes requires sophisticated, expensive and time-consuming experimentation which can be replaced with computational methods.

Training large margin host-pathogen protein-protein interaction predictors

no code implementations21 Nov 2017 Abdul Hannan Basit, Wajid Arshad Abbasi, Amina Asif, Fayyaz ul Amir Afsar Minhas

We have also developed a web server for our HPI predictor called HoPItor (Host Pathogen Interaction predicTOR) that can predict interactions between human and viral proteins.

pyLEMMINGS: Large Margin Multiple Instance Classification and Ranking for Bioinformatics Applications

no code implementations14 Nov 2017 Amina Asif, Wajid Arshad Abbasi, Farzeen Munir, Asa Ben-Hur, Fayyaz ul Amir Afsar Minhas

Motivation: A major challenge in the development of machine learning based methods in computational biology is that data may not be accurately labeled due to the time and resources required for experimentally annotating properties of proteins and DNA sequences.

General Classification Multiple Instance Learning

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