2D and 3D Segmentation of uncertain local collagen fiber orientations in SHG microscopy

1 code implementation • 30 Jul 2019 • Lars Schmarje, Claudius Zelenka, Ulf Geisen, Claus-C. Glüer, Reinhard Koch

Furthermore, we compare a variety of 2D and 3D methods such as classical approaches like Fourier analysis with state-of-the-art deep neural networks for the classification of local fiber orientations.

Segmentation