Search Results for author: Tomohide Masuda

Found 3 papers, 3 papers with code

Generating 3D Molecules Conditional on Receptor Binding Sites with Deep Generative Models

2 code implementations28 Oct 2021 Matthew Ragoza, Tomohide Masuda, David Ryan Koes

The goal of structure-based drug discovery is to find small molecules that bind to a given target protein.

Drug Discovery valid

Learning a Continuous Representation of 3D Molecular Structures with Deep Generative Models

1 code implementation17 Oct 2020 Matthew Ragoza, Tomohide Masuda, David Ryan Koes

Machine learning in drug discovery has been focused on virtual screening of molecular libraries using discriminative models.

Drug Discovery valid

Generating 3D Molecular Structures Conditional on a Receptor Binding Site with Deep Generative Models

1 code implementation16 Oct 2020 Tomohide Masuda, Matthew Ragoza, David Ryan Koes

We show that valid and unique molecules can be readily sampled from the variational latent space defined by a reference `seed' structure and generated structures have reasonable interactions with the binding site.

Decoder valid

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