1 code implementation • 2 Dec 2023 • Sarthak Jain, Sandra E. Safo
Biomedical research now commonly integrates diverse data types or views from the same individuals to better understand the pathobiology of complex diseases, but the challenge lies in meaningfully integrating these diverse views.
1 code implementation • 25 Nov 2023 • Elise F. Palzer, Sandra E. Safo
For users with limited programming language, we provide a Shiny Application to facilitate data integration anywhere and on any device.
2 code implementations • 10 Apr 2023 • Sandra E. Safo, Han Lu
We develop scalable randomized kernel methods for jointly associating data from multiple sources and simultaneously predicting an outcome or classifying a unit into one of two or more classes.
2 code implementations • 18 Nov 2021 • Jiuzhou Wang, Sandra E. Safo
COVID-19 severity is due to complications from SARS-Cov-2 but the clinical course of the infection varies for individuals, emphasizing the need to better understand the disease at the molecular level.
1 code implementation • 26 Feb 2021 • Elise F. Palzer, Christine Wendt, Russell Bowler, Craig P. Hersh, Sandra E. Safo, Eric F. Lock
We propose a method called supervised joint and individual variation explained (sJIVE) that can simultaneously (1) identify shared (joint) and source-specific (individual) underlying structure and (2) build a linear prediction model for an outcome using these structures.