Tensor Factorisation for Polypharmacy Side Effect Prediction

no code implementations • 17 Apr 2024 • Oliver Lloyd, Yi Liu, Tom R. Gaunt

We find, in contrast to previous reports, that for this task tensor factorisation models are competitive with state-of-the-art graph neural network models and we recommend that future work in this field considers cheaper methods with linear complexity before running costly deep learning processes.

Assessing the Effects of Hyperparameters on Knowledge Graph Embedding Quality

1 code implementation • 1 Jul 2022 • Oliver Lloyd, Yi Liu, Tom Gaunt

We regressed the embedding quality on those hyperparameter configurations, using this model to generate Sobol sensitivity indices for each of the hyperparameters.

Knowledge Graph Embedding Knowledge Graphs +2