no code implementations • 22 Nov 2023 • Nicolás Gaggion, Benjamin A. Matheson, Yan Xia, Rodrigo Bonazzola, Nishant Ravikumar, Zeike A. Taylor, Diego H. Milone, Alejandro F. Frangi, Enzo Ferrante
Cardiovascular magnetic resonance imaging is emerging as a crucial tool to examine cardiac morphology and function.
1 code implementation • 1 Sep 2023 • Nicolás Gaggion, Rodrigo Echeveste, Lucas Mansilla, Diego H. Milone, Enzo Ferrante
It has recently been shown that deep learning models for anatomical segmentation in medical images can exhibit biases against certain sub-populations defined in terms of protected attributes like sex or ethnicity.
1 code implementation • 6 Jul 2023 • Nicolás Gaggion, Candelaria Mosquera, Lucas Mansilla, Julia Mariel Saidman, Martina Aineseder, Diego H. Milone, Enzo Ferrante
To address this gap, we introduce an extensive chest X-ray multi-center segmentation dataset with uniform and fine-grain anatomical annotations for images coming from five well-known publicly available databases: ChestX-ray8, Chexpert, MIMIC-CXR-JPG, Padchest, and VinDr-CXR, resulting in 657, 566 segmentation masks.
1 code implementation • 14 Nov 2022 • Nicolás Gaggion, Maria Vakalopoulou, Diego H. Milone, Enzo Ferrante
Learning anatomical segmentation from heterogeneous labels in multi-center datasets is a common situation encountered in clinical scenarios, where certain anatomical structures are only annotated in images coming from particular medical centers, but not in the full database.
2 code implementations • 21 Mar 2022 • Nicolás Gaggion, Lucas Mansilla, Candelaria Mosquera, Diego H. Milone, Enzo Ferrante
To this end, we introduce HybridGNet, an encoder-decoder neural architecture that leverages standard convolutions for image feature encoding and graph convolutional neural networks (GCNNs) to decode plausible representations of anatomical structures.
1 code implementation • 17 Jun 2021 • Nicolás Gaggion, Lucas Mansilla, Diego Milone, Enzo Ferrante
In this work we address the problem of landmark-based segmentation for anatomical structures.