Search Results for author: Muhammad Ardiyansyah

Found 3 papers, 1 papers with code

Embeddability of centrosymmetric matrices capturing the double-helix structure in natural and synthetic DNA

no code implementations11 Feb 2022 Muhammad Ardiyansyah, Dimitra Kosta, Jordi Roca-Lacostena

In this paper, we discuss the embedding problem for centrosymmetric matrices, which are higher order generalizations of the matrices occurring in Strand Symmetric Models.

Distinguishing Level-2 Phylogenetic Networks Using Phylogenetic Invariants

1 code implementation26 Apr 2021 Muhammad Ardiyansyah

Simple and semisimple level-2 networks can be thought as generalizations of level-1 sunlet and cycle networks, respectively.

The Model-Specific Markov Embedding Problem for Symmetric Group-Based Models

no code implementations14 May 2020 Muhammad Ardiyansyah, Dimitra Kosta, Kaie Kubjas

To showcase our main result on model embeddability, we provide an application to hachimoji models, which are eight-state models for synthetic DNA.

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