no code implementations • 12 Apr 2024 • Victor Quintas-Martinez, Mohammad Taha Bahadori, Eduardo Santiago, Jeff Mu, Dominik Janzing, David Heckerman
Comparing two samples of data, we observe a change in the distribution of an outcome variable.
no code implementations • 27 Jul 2021 • Mohammad Taha Bahadori, Eric Tchetgen Tchetgen, David E. Heckerman
In the process of optimization, these weights are automatically tuned to the specific dataset and causal inference algorithm being used.
no code implementations • 1 Jan 2021 • Hongyu Shen, Layne C. Price, Mohammad Taha Bahadori, Franziska Seeger
While protein sequence data is an emerging application domain for machine learning methods, small modifications to protein sequences can result in difficult-to-predict changes to the protein's function.
no code implementations • ICLR 2021 • Mohammad Taha Bahadori, David E. Heckerman
Concept-based explanation approach is a popular model interpertability tool because it expresses the reasons for a model's predictions in terms of concepts that are meaningful for the domain experts.
no code implementations • 8 Nov 2019 • Mohammad Taha Bahadori, Layne C. Price
We also analyze the invariances of BioBERT on clinical notes and discover words that it is invariant to.
no code implementations • 27 Apr 2019 • Mohammad Taha Bahadori, Zachary Chase Lipton
We postulate that fine temporal detail, e. g., whether a series of blood tests are completed at once or in rapid succession should not alter predictions based on this data.
no code implementations • 29 Nov 2018 • Mengqi Jin, Mohammad Taha Bahadori, Aaron Colak, Parminder Bhatia, Busra Celikkaya, Ram Bhakta, Selvan Senthivel, Mohammed Khalilia, Daniel Navarro, Borui Zhang, Tiberiu Doman, Arun Ravi, Matthieu Liger, Taha Kass-Hout
Clinical text provides essential information to estimate the acuity of a patient during hospital stays in addition to structured clinical data.
no code implementations • 8 Feb 2017 • Mohammad Taha Bahadori, Krzysztof Chalupka, Edward Choi, Robert Chen, Walter F. Stewart, Jimeng Sun
In application domains such as healthcare, we want accurate predictive models that are also causally interpretable.
1 code implementation • 21 Nov 2016 • Edward Choi, Mohammad Taha Bahadori, Le Song, Walter F. Stewart, Jimeng Sun
-Interpretation:The representations learned by deep learning methods should align with medical knowledge.
1 code implementation • NeurIPS 2016 • Edward Choi, Mohammad Taha Bahadori, Joshua A. Kulas, Andy Schuetz, Walter F. Stewart, Jimeng Sun
RETAIN was tested on a large health system EHR dataset with 14 million visits completed by 263K patients over an 8 year period and demonstrated predictive accuracy and computational scalability comparable to state-of-the-art methods such as RNN, and ease of interpretability comparable to traditional models.
Ranked #2 on Disease Trajectory Forecasting on UK CF trust
1 code implementation • 20 Feb 2016 • Yuyu Zhang, Mohammad Taha Bahadori, Hang Su, Jimeng Sun
To achieve the best performance, it is often critical to select optimal algorithms and to set appropriate hyperparameters, which requires large computational efforts.
2 code implementations • 17 Feb 2016 • Edward Choi, Mohammad Taha Bahadori, Elizabeth Searles, Catherine Coffey, Jimeng Sun
Learning efficient representations for concepts has been proven to be an important basis for many applications such as machine translation or document classification.
1 code implementation • 18 Nov 2015 • Edward Choi, Mohammad Taha Bahadori, Andy Schuetz, Walter F. Stewart, Jimeng Sun
Leveraging large historical data in electronic health record (EHR), we developed Doctor AI, a generic predictive model that covers observed medical conditions and medication uses.
no code implementations • NeurIPS 2014 • Mohammad Taha Bahadori, Qi (Rose) Yu, Yan Liu
Accurate and efficient analysis of multivariate spatio-temporal data is critical in climatology, geology, and sociology applications.