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Found 2 papers, 2 papers with code
Differentiable Phylogenetics via Hyperbolic Embeddings with Dodonaphy
We present soft-NJ, a differentiable version of neighbour-joining that enables gradient-based optimisation over the space of trees.
Fidelity of Hyperbolic Space for Bayesian Phylogenetic Inference
In this paper, we embed genomic sequences into hyperbolic space and perform hyperbolic Markov Chain Monte Carlo for Bayesian inference.
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