Search Results for author: Lars Ailo Bongo

Found 11 papers, 7 papers with code

Interoperable synthetic health data with SyntHIR to enable the development of CDSS tools

no code implementations4 Aug 2023 Pavitra Chauhan, Mohsen Gamal Saad Askar, Bjørn Fjukstad, Lars Ailo Bongo, Edvard Pedersen

We demonstrate the development of the tool on the SyntHIR system and then lift it to the Open DIPS environment.

More efficient manual review of automatically transcribed tabular data

1 code implementation28 Jun 2023 Bjørn-Richard Pedersen, Rigmor Katrine Johansen, Einar Holsbø, Hilde Sommerseth, Lars Ailo Bongo

We allocated those 90, 000 codes to human reviewers, who used our annotation tool to review the codes.

Publicly available datasets of breast histopathology H&E whole-slide images: A scoping review

no code implementations2 Jun 2023 Masoud Tafavvoghi, Lars Ailo Bongo, Nikita Shvetsov, Lill-Tove Rasmussen Busund, Kajsa Møllersen

In this scoping review, we identified the publicly available datasets of breast H&E stained whole-slide images (WSI) that can be used to develop deep learning algorithms.

Selection bias whole slide images

A Pragmatic Machine Learning Approach to Quantify Tumor Infiltrating Lymphocytes in Whole Slide Images

2 code implementations14 Feb 2022 Nikita Shvetsov, Morten Grønnesby, Edvard Pedersen, Kajsa Møllersen, Lill-Tove Rasmussen Busund, Ruth Schwienbacher, Lars Ailo Bongo, Thomas K. Kilvaer

Our approach is to transfer an open source machine learning method for segmentation and classification of nuclei in H&E slides trained on public data to TIL quantification without manual labeling of our data.

BIG-bench Machine Learning Cell Detection +1

Interactive exploration of population scale pharmacoepidemiology datasets

1 code implementation20 May 2020 Tengel Ekrem Skar, Einar Holsbø, Kristian Svendsen, Lars Ailo Bongo

We have therefore created a tool for interactive exploration of patterns in prescription datasets with millions of samples.

BIG-bench Machine Learning

Reproduction study using public data of: Development and validation of a deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs

1 code implementation PLOS ONE 2019 Mike Voets, Kajsa Møllersen, Lars Ailo Bongo

We have attempted to reproduce the results in Development and validation of a deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs, published in JAMA 2016; 316(22), using publicly available data sets.

Diabetic Retinopathy Grading

Replication study: Development and validation of deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs

1 code implementation12 Mar 2018 Mike Voets, Kajsa Møllersen, Lars Ailo Bongo

We have attempted to replicate the main method in 'Development and validation of a deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs' published in JAMA 2016; 316(22).

Diabetic Retinopathy Detection Medical Image Segmentation +1

Feature Extraction for Machine Learning Based Crackle Detection in Lung Sounds from a Health Survey

no code implementations31 May 2017 Morten Grønnesby, Juan Carlos Aviles Solis, Einar Holsbø, Hasse Melbye, Lars Ailo Bongo

We propose a machine learning based approach for detecting crackles in lung sounds recorded using a stethoscope in a large health survey.

BIG-bench Machine Learning

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