1 code implementation • 8 Aug 2023 • Jiarong Ye, Haomiao Ni, Peng Jin, Sharon X. Huang, Yuan Xue
To further reduce the dependency on annotated data, we propose a synthetic augmentation method called HistoDiffusion, which can be pre-trained on large-scale unlabeled datasets and later applied to a small-scale labeled dataset for augmented training.
no code implementations • 5 Jun 2022 • Jiarong Ye, Yin-Ting Yeh, Yuan Xue, Ziyang Wang, Na Zhang, He Liu, Kunyan Zhang, RyeAnne Ricker, Zhuohang Yu, Allison Roder, Nestor Perea Lopez, Lindsey Organtini, Wallace Greene, Susan Hafenstein, Huaguang Lu, Elodie Ghedin, Mauricio Terrones, Shengxi Huang, Sharon Xiaolei Huang
We present such a machine learning approach for analyzing Raman spectra of human and avian viruses.
no code implementations • 10 Nov 2021 • Yuan Xue, Jiarong Ye, Qianying Zhou, Rodney Long, Sameer Antani, Zhiyun Xue, Carl Cornwell, Richard Zaino, Keith Cheng, Xiaolei Huang
Histopathological analysis is the present gold standard for precancerous lesion diagnosis.
1 code implementation • 10 Nov 2021 • Jiarong Ye, Yuan Xue, Peter Liu, Richard Zaino, Keith Cheng, Xiaolei Huang
Generative models have been applied in the medical imaging domain for various image recognition and synthesis tasks.
no code implementations • 26 Aug 2020 • Jiarong Ye, Yuan Xue, L. Rodney Long, Sameer Antani, Zhiyun Xue, Keith Cheng, Xiaolei Huang
However, the quality control of synthetic images for data augmentation purposes is under-investigated, and some of the generated images are not realistic and may contain misleading features that distort data distribution when mixed with real images.
no code implementations • 9 Dec 2019 • Yuan Xue, Jiarong Ye, Rodney Long, Sameer Antani, Zhiyun Xue, Xiaolei Huang
To mitigate these issues, we investigate a novel data augmentation pipeline that selectively adds new synthetic images generated by conditional Adversarial Networks (cGANs), rather than extending directly the training set with synthetic images.
no code implementations • 24 Jul 2019 • Yuan Xue, Qianying Zhou, Jiarong Ye, L. Rodney Long, Sameer Antani, Carl Cornwell, Zhiyun Xue, Xiaolei Huang
Our models are evaluated on a cervical histopathology image dataset with a limited number of patch-level CIN grade annotations.