3D-based RNA function prediction tools in rnaglib

1 code implementation • 14 Feb 2024 • Carlos Oliver, Vincent Mallet, Jérôme Waldispühl

Understanding the connection between complex structural features of RNA and biological function is a fundamental challenge in evolutionary studies and in RNA design.

RNAglib: A Python Package for RNA 2.5D Graphs

1 code implementation • 9 Sep 2021 • Vincent Mallet, Carlos Oliver, Jonathan Broadbent, William L. Hamilton, Jérôme Waldispühl

RNA 3D architectures are stabilized by sophisticated networks of (non-canonical) base pair interactions, which can be conveniently encoded as multi-relational graphs and efficiently exploited by graph theoretical approaches and recent progresses in machine learning techniques.

BIG-bench Machine Learning