1 code implementation • 31 Jan 2024 • Aymeric Gaudin, Louise Guillon, Clara Fischer, Arnaud Cachia, Denis Rivière, Jean-François Mangin, Joël Chavas
Here, we build a self-supervised deep-learning model to detect folding patterns in the cingulate region.
1 code implementation • 2 Mar 2023 • Nabil Vindas, Nicole Labra Avila, Fan Zhang, Tengfei Xue, Lauren J. O'Donnell, Jean-François Mangin
Superficial white matter (SWM) has been less studied than long-range connections despite being of interest to clinical research, andfew tractography parcellation methods have been adapted to SWM.
1 code implementation • 29 Nov 2022 • Louise Guillon, Joël Chavas, Audrey Bénézit, Marie-Laure Moutard, Denis Rivière, Jean-François Mangin
To this end, we preprocess the brain MR images to focus the learning on the folding morphology and train a beta-VAE to model the inter-individual variability of the folding.
1 code implementation • 26 Mar 2021 • Narciso López-López, Andrea Vázquez, Cyril Poupon, Jean-François Mangin, Susana Ladra, Pamela Guevara
We present GeoSP, a parallel method that creates a parcellation of the cortical mesh based on a geodesic distance, in order to consider gyri and sulci topology.
1 code implementation • 11 Feb 2021 • Michael Schirner, Lia Domide, Dionysios Perdikis, Paul Triebkorn, Leon Stefanovski, Roopa Pai, Paula Popa, Bogdan Valean, Jessica Palmer, Chloê Langford, André Blickensdörfer, Michiel van der Vlag, Sandra Diaz-Pier, Alexander Peyser, Wouter Klijn, Dirk Pleiter, Anne Nahm, Oliver Schmid, Marmaduke Woodman, Lyuba Zehl, Jan Fousek, Spase Petkoski, Lionel Kusch, Meysam Hashemi, Daniele Marinazzo, Jean-François Mangin, Agnes Flöel, Simisola Akintoye, Bernd Carsten Stahl, Michael Cepic, Emily Johnson, Anthony R. McIntosh, Claus C. Hilgetag, Marc Morgan, Bernd Schuller, Alex Upton, Colin McMurtrie, Timo Dickscheid, Jan G. Bjaalie, Katrin Amunts, Jochen Mersmann, Viktor Jirsa, Petra Ritter
The Virtual Brain (TVB) is now available as open-source cloud ecosystem on EBRAINS, a shared digital research platform for brain science.
Bayesian Inference Code Generation Computational Engineering, Finance, and Science Cryptography and Security Distributed, Parallel, and Cluster Computing Neurons and Cognition Quantitative Methods
no code implementations • 16 Feb 2020 • Narciso López-López, Andrea Vázquez, Cyril Poupon, Jean-François Mangin, Pamela Guevara
The output is the complete labeling of cortical mesh vertices, representing the different cortex sub-parcels, with strong connections to other sub-parcels.
no code implementations • 24 Dec 2019 • Andrea Vázquez, Narciso López-López, Nicole Labra, Miguel Figueroa, Cyril Poupon, Jean-François Mangin, Cecilia Hernández, Pamela Guevara
We present an optimized algorithm that performs automatic classification of white matter fibers based on a multi-subject bundle atlas.