Search Results for author: Jadie Adams

Found 12 papers, 5 papers with code

SCorP: Statistics-Informed Dense Correspondence Prediction Directly from Unsegmented Medical Images

no code implementations27 Apr 2024 Krithika Iyer, Jadie Adams, Shireen Y. Elhabian

Traditional methods for shape modeling from imaging data demand significant manual and computational resources.

Estimation and Analysis of Slice Propagation Uncertainty in 3D Anatomy Segmentation

1 code implementation18 Mar 2024 Rachaell Nihalaani, Tushar Kataria, Jadie Adams, Shireen Y. Elhabian

This limitation has led to a growing interest in self-supervised approaches in tandem with the abundance of available un-annotated data.

Anatomy Segmentation +1

Progressive DeepSSM: Training Methodology for Image-To-Shape Deep Models

no code implementations2 Oct 2023 Abu Zahid Bin Aziz, Jadie Adams, Shireen Elhabian

The training is performed in multiple scales, and each scale utilizes the output from the previous scale.

Multi-Task Learning

Benchmarking Scalable Epistemic Uncertainty Quantification in Organ Segmentation

1 code implementation15 Aug 2023 Jadie Adams, Shireen Y. Elhabian

Deep learning based methods for automatic organ segmentation have shown promise in aiding diagnosis and treatment planning.

Benchmarking Organ Segmentation +3

Point2SSM: Learning Morphological Variations of Anatomies from Point Cloud

1 code implementation23 May 2023 Jadie Adams, Shireen Elhabian

We present Point2SSM, a novel unsupervised learning approach for constructing correspondence-based statistical shape models (SSMs) directly from raw point clouds.

Anatomy Representation Learning

Fully Bayesian VIB-DeepSSM

1 code implementation9 May 2023 Jadie Adams, Shireen Elhabian

We derive a fully Bayesian VIB formulation and demonstrate the efficacy of two scalable implementation approaches: concrete dropout and batch ensemble.

Anatomy Uncertainty Quantification +1

Can point cloud networks learn statistical shape models of anatomies?

1 code implementation9 May 2023 Jadie Adams, Shireen Elhabian

Statistical Shape Modeling (SSM) is a valuable tool for investigating and quantifying anatomical variations within populations of anatomies.

Semantic Segmentation

Cosmic Microwave Background Recovery: A Graph-Based Bayesian Convolutional Network Approach

no code implementations24 Feb 2023 Jadie Adams, Steven Lu, Krzysztof M. Gorski, Graca Rocha, Kiri L. Wagstaff

The cosmic microwave background (CMB) is a significant source of knowledge about the origin and evolution of our universe.

Spatiotemporal Cardiac Statistical Shape Modeling: A Data-Driven Approach

no code implementations6 Sep 2022 Jadie Adams, Nawazish Khan, Alan Morris, Shireen Elhabian

Clinical investigations of anatomy's structural changes over time could greatly benefit from population-level quantification of shape, or spatiotemporal statistic shape modeling (SSM).

Specificity Time Series +1

From Images to Probabilistic Anatomical Shapes: A Deep Variational Bottleneck Approach

no code implementations13 May 2022 Jadie Adams, Shireen Elhabian

This constraint restricts the learning task to solely estimating pre-defined shape descriptors from 3D images and imposes a linear relationship between this shape representation and the output (i. e., shape) space.

Anatomy Decision Making

DeepSSM: A Blueprint for Image-to-Shape Deep Learning Models

no code implementations14 Oct 2021 Riddhish Bhalodia, Shireen Elhabian, Jadie Adams, Wenzheng Tao, Ladislav Kavan, Ross Whitaker

Here, we propose DeepSSM, a deep learning-based framework for learning the functional mapping from images to low-dimensional shape descriptors and their associated shape representations, thereby inferring statistical representation of anatomy directly from 3D images.

Anatomy Data Augmentation

Uncertain-DeepSSM: From Images to Probabilistic Shape Models

no code implementations13 Jul 2020 Jadie Adams, Riddhish Bhalodia, Shireen Elhabian

Statistical shape modeling (SSM) has recently taken advantage of advances in deep learning to alleviate the need for a time-consuming and expert-driven workflow of anatomy segmentation, shape registration, and the optimization of population-level shape representations.

Anatomy

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