Search Results for author: Jacob L. Jaremko

Found 10 papers, 2 papers with code

A Simple Framework Uniting Visual In-context Learning with Masked Image Modeling to Improve Ultrasound Segmentation

1 code implementation22 Feb 2024 Yuyue Zhou, Banafshe Felfeliyan, Shrimanti Ghosh, Jessica Knight, Fatima Alves-Pereira, Christopher Keen, Jessica Küpper, Abhilash Rakkunedeth Hareendranathan, Jacob L. Jaremko

Conventional deep learning models deal with images one-by-one, requiring costly and time-consuming expert labeling in the field of medical imaging, and domain-specific restriction limits model generalizability.

In-Context Learning Segmentation +1

Weakly Supervised Medical Image Segmentation With Soft Labels and Noise Robust Loss

no code implementations16 Sep 2022 Banafshe Felfeliyan, Abhilash Hareendranathan, Gregor Kuntze, Stephanie Wichuk, Nils D. Forkert, Jacob L. Jaremko, Janet L. Ronsky

The aim of this paper was to develop and evaluate a method to generate probabilistic labels based on multi-rater annotations and anatomical knowledge of the lesion features in MRI and a method to train segmentation models using probabilistic labels using normalized active-passive loss as a "noise-tolerant loss" function.

Image Segmentation Medical Diagnosis +3

Self-Supervised-RCNN for Medical Image Segmentation with Limited Data Annotation

no code implementations17 Jul 2022 Banafshe Felfeliyan, Abhilash Hareendranathan, Gregor Kuntze, David Cornell, Nils D. Forkert, Jacob L. Jaremko, Janet L. Ronsky

The effectiveness of the proposed method for segmentation tasks in different pre-training and fine-tuning scenarios is evaluated based on the Osteoarthritis Initiative dataset.

Anomaly Detection Image Segmentation +4

Improved-Mask R-CNN: Towards an Accurate Generic MSK MRI instance segmentation platform (Data from the Osteoarthritis Initiative)

no code implementations27 Jul 2021 Banafshe Felfeliyan, Abhilash Hareendranathan, Gregor Kuntze, Jacob L. Jaremko, Janet L. Ronsky

The iMaskRCNN led to improved bone and cartilage segmentation compared to Mask RCNN as indicated with the increase in dice score from 95% to 98% for the femur, 95% to 97% for tibia, 71% to 80% for femoral cartilage, and 81% to 82% for tibial cartilage.

Instance Segmentation Segmentation +1

Sample Efficient Learning of Image-Based Diagnostic Classifiers Using Probabilistic Labels

no code implementations11 Feb 2021 Roberto Vega, Pouneh Gorji, Zichen Zhang, Xuebin Qin, Abhilash Rakkunedeth Hareendranathan, Jeevesh Kapur, Jacob L. Jaremko, Russell Greiner

This complicates its use in tasks like image-based medical diagnosis, where the small training datasets are usually insufficient to learn appropriate data representations.

Medical Diagnosis

A systematic review on the role of artificial intelligence in sonographic diagnosis of thyroid cancer: Past, present and future

no code implementations10 Jun 2020 Fatemeh Abdolali, Atefeh Shahroudnejad, Abhilash Rakkunedeth Hareendranathan, Jacob L. Jaremko, Michelle Noga, Kumaradevan Punithakumar

With more than 50 papers included in this review, we reflect on the trends and challenges of the field of sonographic diagnosis of thyroid malignancies and potential of computer-aided diagnosis to increase the impact of ultrasound applications on the future of thyroid cancer diagnosis.

End-to-end detection-segmentation network with ROI convolution

1 code implementation8 Jan 2018 Zichen Zhang, Min Tang, Dana Cobzas, Dornoosh Zonoobi, Martin Jagersand, Jacob L. Jaremko

We propose an end-to-end neural network that improves the segmentation accuracy of fully convolutional networks by incorporating a localization unit.

Object Localization Segmentation

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