no code implementations • 12 Nov 2023 • Khadijeh, Jahanian, Elnaz Shalbafian, Morteza Saberi, Roohallah Alizadehsani, Iman Dehzangi
Our analyses reveal that either APOBEC3 enzymes are not active against HBV, or the induction of G-to-A mutations by these enzymes is not sequence context-dependent in the HBV genome.
no code implementations • 26 Feb 2023 • Mohsen Karami, Roohallah Alizadehsani, Khadijeh, Jahanian, Ahmadreza Argha, Iman Dehzangi, Hamid Alinejad-Rokny
In recent years, Reinforcement Learning (RL) has emerged as a powerful tool for solving a wide range of problems, including decision-making and genomics.
no code implementations • 7 Feb 2023 • Seyedeh Sedigheh Abedini, Shiva Akhavan, Julian Heng, Roohallah Alizadehsani, Iman Dehzangi, Denis C. Bauer, Hamid Rokny
Of the remaining 30 regions, we identify 24 regions containing at least one protein-coding genes with brain-enriched expression and nervous system phenotype in mouse mutant and one lncRNAs with both brain-enriched expression and upregulation in iPSC to neuron differentiation.