1 code implementation • 5 Dec 2023 • Justin Engelmann, Jamie Burke, Charlene Hamid, Megan Reid-Schachter, Dan Pugh, Neeraj Dhaun, Diana Moukaddem, Lyle Gray, Niall Strang, Paul McGraw, Amos Storkey, Paul J. Steptoe, Stuart King, Tom MacGillivray, Miguel O. Bernabeu, Ian J. C. MacCormick
We analysed segmentation agreement (AUC, Dice) and choroid metrics agreement (Pearson, Spearman, mean absolute error (MAE)) in internal and external test sets.
1 code implementation • 3 Jul 2023 • Jamie Burke, Justin Engelmann, Charlene Hamid, Megan Reid-Schachter, Tom Pearson, Dan Pugh, Neeraj Dhaun, Stuart King, Tom MacGillivray, Miguel O. Bernabeu, Amos Storkey, Ian J. C. MacCormick
Results: DeepGPET achieves excellent agreement with GPET on data from 3 clinical studies (AUC=0. 9994, Dice=0. 9664; Pearson correlation of 0. 8908 for choroidal thickness and 0. 9082 for choroidal area), while reducing the mean processing time per image on a standard laptop CPU from 34. 49s ($\pm$15. 09) using GPET to 1. 25s ($\pm$0. 10) using DeepGPET.
1 code implementation • 19 Jun 2023 • Jamie Burke, Dan Pugh, Tariq Farrah, Charlene Hamid, Emily Godden, Tom MacGillivray, Neeraj Dhaun, J. Kenneth Baillie, Stuart King, Ian J. C. MacCormick
Significant associations were mostly stronger with automated CT (eGFR P<0. 001, creatinine P=0. 004, urea P=0. 04) compared to manual CT (eGFR P=0. 002, creatinine P=0. 01, urea P=0. 03).
1 code implementation • 11 Mar 2022 • Justin Engelmann, Alice D. McTrusty, Ian J. C. MacCormick, Emma Pead, Amos Storkey, Miguel O. Bernabeu
Previous studies showed that deep learning (DL) models are effective for detecting retinal disease in UWF images, but primarily considered individual diseases under less-than-realistic conditions (excluding images with other diseases, artefacts, comorbidities, or borderline cases; and balancing healthy and diseased images) and did not systematically investigate which regions of the UWF images are relevant for disease detection.