Search Results for author: Henry Adams

Found 9 papers, 5 papers with code

A Primer on Topological Data Analysis to Support Image Analysis Tasks in Environmental Science

1 code implementation21 Jul 2022 Lander Ver Hoef, Henry Adams, Emily J. King, Imme Ebert-Uphoff

One of the core strengths of persistent homology is how interpretable it can be, so throughout this paper we discuss not just the patterns we find, but why those results are to be expected given what we know about the theory of persistent homology.

Topological Data Analysis

Geometric Approaches on Persistent Homology

no code implementations11 Mar 2021 Henry Adams, Baris Coskunuzer

We introduce several geometric notions, including the width of a homology class, to the theory of persistent homology.

Algebraic Topology Computational Geometry Geometric Topology 55N31, 55U10, 57R19, 62R40

Topology Applied to Machine Learning: From Global to Local

no code implementations10 Mar 2021 Henry Adams, Michael Moy

Additionally, we survey work connecting persistent homology to geometric features of spaces, including curvature and fractal dimension, and various methods that have been used to incorporate persistent homology into machine learning.

BIG-bench Machine Learning

Lions and contamination, triangular grids, and Cheeger constants

no code implementations12 Dec 2020 Henry Adams, Leah Gibson, Jack Pfaffinger

Suppose each vertex of a graph is originally occupied by contamination, except for those vertices occupied by lions.

Combinatorics Data Structures and Algorithms

Representations of Energy Landscapes by Sublevelset Persistent Homology: An Example With n-Alkanes

1 code implementation2 Nov 2020 Joshua Mirth, Yanqin Zhai, Johnathan Bush, Enrique G Alvarado, Howie Jordan, Mark Heim, Bala Krishnamoorthy, Markus Pflaum, Aurora Clark, Y Z, Henry Adams

Encoding the complex features of an energy landscape is a challenging task, and often chemists pursue the most salient features (minima and barriers) along a highly reduced space, i. e. 2- or 3-dimensions.

Chemical Physics Mathematical Physics Algebraic Topology Mathematical Physics

Support vector machines and Radon's theorem

1 code implementation1 Nov 2020 Henry Adams, Elin Farnell, Brittany Story

A support vector machine (SVM) is an algorithm that finds a hyperplane which optimally separates labeled data points in $\mathbb{R}^n$ into positive and negative classes.

Capturing Dynamics of Time-Varying Data via Topology

no code implementations7 Oct 2020 Lu Xian, Henry Adams, Chad M. Topaz, Lori Ziegelmeier

One approach to understanding complex data is to study its shape through the lens of algebraic topology.

Topological Data Analysis

Persistence Images: A Stable Vector Representation of Persistent Homology

4 code implementations22 Jul 2015 Henry Adams, Sofya Chepushtanova, Tegan Emerson, Eric Hanson, Michael Kirby, Francis Motta, Rachel Neville, Chris Peterson, Patrick Shipman, Lori Ziegelmeier

We convert a PD to a finite-dimensional vector representation which we call a persistence image (PI), and prove the stability of this transformation with respect to small perturbations in the inputs.

BIG-bench Machine Learning Graph Classification +1

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