no code implementations • 14 Feb 2023 • Gengmo Zhou, Zhifeng Gao, Zhewei Wei, Hang Zheng, Guolin Ke
However, to our surprise, we design a simple and cheap algorithm (parameter-free) based on the traditional methods and find it is comparable to or even outperforms deep learning based MCG methods in the widely used GEOM-QM9 and GEOM-Drugs benchmarks.
no code implementations • 18 Sep 2022 • Yang Zhang, Gengmo Zhou, Zhewei Wei, Hongteng Xu
The prediction of protein-ligand binding affinity is of great significance for discovering lead compounds in drug research.
1 code implementation • ChemRxiv 2022 • Gengmo Zhou, Zhifeng Gao, Qiankun Ding, Hang Zheng, Hongteng Xu, Zhewei Wei, Linfeng Zhang, Guolin Ke
Uni-Mol is composed of two models with the same SE(3)-equivariant transformer architecture: a molecular pretraining model trained by 209M molecular conformations; a pocket pretraining model trained by 3M candidate protein pocket data.
Ranked #1 on Molecular Property Prediction on MUV