no code implementations • EMNLP (NLP-COVID19) 2020 • Marcia Afonso Barros, Andre Lamurias, Diana Sousa, Pedro Ruas, Francisco M. Couto
With the increasing number of publications about COVID-19, it is a challenge to extract personalized knowledge suitable for each researcher.
no code implementations • 10 Aug 2023 • Pedro Ruas, Diana F. Sousa, André Neves, Carlos Cruz, Francisco M. Couto
Biomedical Natural Language Processing (NLP) tends to become cumbersome for most researchers, frequently due to the amount and heterogeneity of text to be processed.
no code implementations • 14 May 2020 • Sérgio Nunes, Suzanne Little, Sumit Bhatia, Ludovico Boratto, Guillaume Cabanac, Ricardo Campos, Francisco M. Couto, Stefano Faralli, Ingo Frommholz, Adam Jatowt, Alípio Jorge, Mirko Marras, Philipp Mayr, Giovanni Stilo
In this report, we describe the experience of organizing the ECIR 2020 Workshops in this scenario from two perspectives: the workshop organizers and the workshop participants.
1 code implementation • 6 Feb 2020 • Andre Lamurias, Diana Sousa, Francisco M. Couto
The proposed framework can be used to update the BiQA corpus from the same forums as new posts are made, and from other forums that support their answers with documents.
1 code implementation • 21 Jan 2020 • Marcia Barros, André Moitinho, Francisco M. Couto
In this work, we propose a Hybrid recommender model for recommending Chemical Compounds.
1 code implementation • 20 Jan 2020 • Diana Sousa, Francisco M. Couto
Successful biomedical relation extraction can provide evidence to researchers and clinicians about possible unknown associations between biomedical entities, advancing the current knowledge we have about those entities and their inherent mechanisms.
no code implementations • WS 2019 • Andre Lamurias, Francisco M. Couto
This approach shared the same pre-trained weights, but which were then fine-tuned for each task using the provided training data.
no code implementations • 27 May 2019 • Diana Sousa, Andre Lamurias, Francisco M. Couto
Several relation extraction approaches have been proposed to identify relations between concepts in biomedical literature, namely, using neural networks algorithms.
1 code implementation • NAACL 2019 • Diana Sousa, Andre Lamurias, Francisco M. Couto
This paper presents the Phenotype-Gene Relations (PGR) corpus, a silver standard corpus of human phenotype and gene annotations and their relations.
no code implementations • SEMEVAL 2017 • Miguel J. Rodrigues, Francisco M. Couto
This paper describes our system, dubbed MoRS (Modular Ranking System), pronounced {`}Morse{'}, which participated in Task 3 of SemEval-2017.
1 code implementation • SEMEVAL 2017 • Andre Lamurias, Diana Sousa, Sofia Pereira, Luka Clarke, Francisco M. Couto
This paper presents our approach to participate in the SemEval 2017 Task 12: Clinical TempEval challenge, specifically in the event and time expressions span and attribute identification subtasks (ES, EA, TS, TA).
no code implementations • 27 Sep 2016 • Miguel J. Rodrigues, Miguel Falé, Andre Lamurias, Francisco M. Couto
This paper describes our system, dubbed WS4A (Web Services for All), that participated in the fourth edition of the BioASQ challenge (2016).