VICE: Visual Identification and Correction of Neural Circuit Errors

no code implementations • 14 May 2021 • Felix Gonda, Xueying Wang, Johanna Beyer, Markus Hadwiger, Jeff W. Lichtman, Hanspeter Pfister

A connectivity graph of neurons at the resolution of single synapses provides scientists with a tool for understanding the nervous system in health and disease.

Clustering Image Segmentation +2

Consistent Recurrent Neural Networks for 3D Neuron Segmentation

no code implementations • 1 Feb 2021 • Felix Gonda, Donglai Wei, Hanspeter Pfister

We present a recurrent network for the 3D reconstruction of neurons that sequentially generates binary masks for every object in an image with spatio-temporal consistency.

3D Reconstruction Object

Parallel Separable 3D Convolution for Video and Volumetric Data Understanding

no code implementations • 11 Sep 2018 • Felix Gonda, Donglai Wei, Toufiq Parag, Hanspeter Pfister

For video and volumetric data understanding, 3D convolution layers are widely used in deep learning, however, at the cost of increasing computation and training time.

Action Recognition Brain Segmentation +2

Icon: An Interactive Approach to Train Deep Neural Networks for Segmentation of Neuronal Structures

no code implementations • 27 Oct 2016 • Felix Gonda, Verena Kaynig, Ray Thouis, Daniel Haehn, Jeff Lichtman, Toufiq Parag, Hanspeter Pfister

We present an interactive approach to train a deep neural network pixel classifier for the segmentation of neuronal structures.

Image Segmentation Segmentation +1