no code implementations • 14 May 2023 • David E. Graff, Edward O. Pyzer-Knapp, Kirk E. Jordan, Eugene I. Shakhnovich, Connor W. Coley
When the correlation between structure and property weakens, a dataset is described as "rough," but this characteristic is partly a function of the chosen representation.
no code implementations • 17 Dec 2020 • Sanchari Bhattacharyyaa, Shimon Bershtein, Bharat V. Adkara, Jaie Woodarda, Eugene I. Shakhnovich
We show that a highly cooperative (Hill coefficient 2. 5) in vivo activity of Thymidylate Kinase (Tmk), a downstream enzyme that phosphorylates dTMP to dTDP, is the cause of suboptimal dTTP levels.
no code implementations • 17 Dec 2020 • Eugene Serebryany, Sourav Chowdhury, Nicki E. Watson, Arthur McClelland, Eugene I. Shakhnovich
Cataract is one of the most prevalent protein aggregation disorders and still the biggest cause of vision loss worldwide.
1 code implementation • 13 Dec 2020 • David E. Graff, Eugene I. Shakhnovich, Connor W. Coley
Structure-based virtual screening is an important tool in early stage drug discovery that scores the interactions between a target protein and candidate ligands.
no code implementations • 7 Apr 2020 • Victor Zhao, William M. Jacobs, Eugene I. Shakhnovich
Low contact order proteins evolve to fold cotranslationally.