1 code implementation • 4 Dec 2023 • Hong Liu, Dong Wei, Donghuan Lu, Xiaoying Tang, Liansheng Wang, Yefeng Zheng
Experiments on a synthetic dataset and three public clinical datasets show that our framework can effectively align the B-scans for potential motion correction, and achieves superior performance to state-of-the-art 2D deep learning methods in terms of both layer segmentation accuracy and cross-B-scan 3D continuity in both fully and semi-supervised settings, thus offering more clinical values than previous works.
1 code implementation • 22 Sep 2023 • Dong Wei, Yawen Huang, Donghuan Lu, Yuexiang Li, Yefeng Zheng
Then, a multi-view planning strategy is proposed to aggregate information from the predicted heatmaps for all the source views of a target plane, for a globally optimal prescription, mimicking the similar strategy practiced by skilled human prescribers.
no code implementations • 18 Jul 2023 • Jinghan Sun, Dong Wei, Zhe Xu, Donghuan Lu, Hong Liu, Liansheng Wang, Yefeng Zheng
Inversely, we also use the prediction of the vision detection model for abnormality-guided pseudo classification label refinement (APCLR) in the auxiliary report classification task, and propose a co-evolution strategy where the vision and report models mutually promote each other with RPDLR and APCLR performed alternatively.
1 code implementation • 9 Mar 2023 • Hong Liu, Dong Wei, Donghuan Lu, Jinghan Sun, Liansheng Wang, Yefeng Zheng
In the first stage, a multimodal masked autoencoder (M3AE) is proposed, where both random modalities (i. e., modality dropout) and random patches of the remaining modalities are masked for a reconstruction task, for self-supervised learning of robust multimodal representations against missing modalities.
no code implementations • 1 Mar 2023 • Lianyu Zhou, Dong Wei, Donghuan Lu, Wei Xue, Liansheng Wang, Yefeng Zheng
As an essential indicator for cancer progression and treatment response, tumor size is often measured following the response evaluation criteria in solid tumors (RECIST) guideline in CT slices.
1 code implementation • 18 Jan 2023 • Munan Ning, Donghuan Lu, Yujia Xie, Dongdong Chen, Dong Wei, Yefeng Zheng, Yonghong Tian, Shuicheng Yan, Li Yuan
Unsupervised domain adaption has been widely adopted in tasks with scarce annotated data.
no code implementations • 31 Aug 2022 • Shuo Chen, Da Ma, Sieun Lee, Timothy T. L. Yu, Gavin Xu, Donghuan Lu, Karteek Popuri, Myeong Jin Ju, Marinko V. Sarunic, Mirza Faisal Beg
Optical Coherence Tomography(OCT) is a non-invasive technique capturing cross-sectional area of the retina in micro-meter resolutions.
1 code implementation • 18 Jul 2022 • Xinyu Shi, Dong Wei, Yu Zhang, Donghuan Lu, Munan Ning, Jiashun Chen, Kai Ma, Yefeng Zheng
A key to this challenging task is to fully utilize the information in the support images by exploiting fine-grained correlations between the query and support images.
Ranked #4 on Few-Shot Semantic Segmentation on COCO-20i (1-shot)
1 code implementation • 7 Jul 2022 • Jiashun Chen, Donghuan Lu, Yu Zhang, Dong Wei, Munan Ning, Xinyu Shi, Zhe Xu, Yefeng Zheng
In this study, we propose a novel Deformer module along with a multi-scale framework for the deformable image registration task.
1 code implementation • 4 Mar 2022 • Hong Liu, Dong Wei, Donghuan Lu, Yuexiang Li, Kai Ma, Liansheng Wang, Yefeng Zheng
To the best of our knowledge, this is the first study that attempts 3D retinal layer segmentation in volumetric OCT images based on CNNs.
1 code implementation • 28 Sep 2021 • Zhe Xu, Yixin Wang, Donghuan Lu, Lequan Yu, Jiangpeng Yan, Jie Luo, Kai Ma, Yefeng Zheng, Raymond Kai-yu Tong
Observing this, we ask an unexplored but interesting question: can we exploit the unlabeled data via explicit real label supervision for semi-supervised training?
no code implementations • 12 Sep 2021 • Da Ma, Donghuan Lu, Karteek Popuri, Mirza Faisal Beg
Frontotemporal dementia and Alzheimer's disease are two common forms of dementia and are easily misdiagnosed as each other due to their similar pattern of clinical symptoms.
2 code implementations • ICCV 2021 • Munan Ning, Donghuan Lu, Dong Wei, Cheng Bian, Chenglang Yuan, Shuang Yu, Kai Ma, Yefeng Zheng
Unsupervised domain adaption has proven to be an effective approach for alleviating the intensive workload of manual annotation by aligning the synthetic source-domain data and the real-world target-domain samples.
no code implementations • 6 Jul 2021 • Zhe Xu, Jie Luo, Donghuan Lu, Jiangpeng Yan, Sarah Frisken, Jayender Jagadeesan, William Wells III, Xiu Li, Yefeng Zheng, Raymond Tong
Such convention has two limitations: (i) Besides the laborious grid search for the optimal fixed weight, the regularization strength of a specific image pair should be associated with the content of the images, thus the "one value fits all" training scheme is not ideal; (ii) Only spatially regularizing the transformation may neglect some informative clues related to the ill-posedness.
1 code implementation • 3 Jun 2021 • Zhe Xu, Donghuan Lu, Yixin Wang, Jie Luo, Jayender Jagadeesan, Kai Ma, Yefeng Zheng, Xiu Li
Manually segmenting the hepatic vessels from Computer Tomography (CT) is far more expertise-demanding and laborious than other structures due to the low-contrast and complex morphology of vessels, resulting in the extreme lack of high-quality labeled data.
1 code implementation • ECCV 2020 • Junjie Zhao, Donghuan Lu, Kai Ma, Yu Zhang, Yefeng Zheng
In this paper, we propose a novel deep image clustering framework to learn a category-style latent representation in which the category information is disentangled from image style and can be directly used as the cluster assignment.
no code implementations • 20 Jul 2020 • Munan Ning, Cheng Bian, Donghuan Lu, Hong-Yu Zhou, Shuang Yu, Chenglang Yuan, Yang Guo, Yaohua Wang, Kai Ma, Yefeng Zheng
Primary angle closure glaucoma (PACG) is the leading cause of irreversible blindness among Asian people.
no code implementations • 19 Mar 2020 • Donghuan Lu, Sujun Zhao, Peng Xie, Kai Ma, Li-Juan Liu, Yefeng Zheng
To ensure the quality of reconstructed neurons and provide guidance for annotators to improve their efficiency, we propose a deep learning based quality control method for neuron reconstruction in this paper.
no code implementations • MIDL 2019 • Da Ma, Donghuan Lu, Morgan Heisler, Setareh Dabiri, Sieun Lee, Gavin Weiguan Ding, Marinko V. Sarunic, Mirza Faisal Beg
Optical coherence tomography (OCT) is a non-invasive imaging technology that can provide micrometer-resolution cross-sectional images of the inner structures of the eye.
no code implementations • 7 Dec 2019 • Donghuan Lu, Morgan Heisler, Da Ma, Setareh Dabiri, Sieun Lee, Gavin Weiguang Ding, Marinko V. Sarunic, Mirza Faisal Beg
Optical coherence tomography (OCT) is a non-invasive imaging technology which can provide micrometer-resolution cross-sectional images of the inner structures of the eye.
no code implementations • 2 Nov 2017 • Karteek Popuri, Rakesh Balachandar, Kathryn Alpert, Donghuan Lu, Mahadev Bhalla, Ian Mackenzie, Robin Ging-Yuek Hsiung, Lei Wang, Mirza Faisal Beg, the Alzhemier's Disease Neuroimaging Initiative
Fluorodeoxyglucose positron emission tomography (FDG-PET) imaging based 3D topographic brain glucose metabolism patterns from normal controls (NC) and individuals with dementia of Alzheimer's type (DAT) are used to train a novel multi-scale ensemble classification model.
no code implementations • 13 Oct 2017 • Donghuan Lu, Karteek Popuri, Weiguang Ding, Rakesh Balachandar, Mirza Faisal Beg
Alzheimer's Disease (AD) is a progressive neurodegenerative disease.
no code implementations • 13 Oct 2017 • Donghuan Lu, Morgan Heisler, Sieun Lee, Gavin Ding, Marinko V. Sarunic, Mirza Faisal Beg
As a non-invasive imaging modality, optical coherence tomography (OCT) can provide micrometer-resolution 3D images of retinal structures.