Search Results for author: Clare M. Tempany

Found 5 papers, 1 papers with code

Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation

no code implementations29 Nov 2019 Alireza Mehrtash, William M. Wells III, Clare M. Tempany, Purang Abolmaesumi, Tina Kapur

We make the following contributions: 1) We systematically compare cross entropy loss with Dice loss in terms of segmentation quality and uncertainty estimation of FCNs; 2) We propose model ensembling for confidence calibration of the FCNs trained with batch normalization and Dice loss; 3) We assess the ability of calibrated FCNs to predict segmentation quality of structures and detect out-of-distribution test examples.

Image Segmentation Medical Image Segmentation +3

Deep Information Theoretic Registration

no code implementations31 Dec 2018 Alireza Sedghi, Jie Luo, Alireza Mehrtash, Steve Pieper, Clare M. Tempany, Tina Kapur, Parvin Mousavi, William M. Wells III

This paper establishes an information theoretic framework for deep metric based image registration techniques.

Image Registration

Repeatability of Multiparametric Prostate MRI Radiomics Features

2 code implementations16 Jul 2018 Michael Schwier, Joost van Griethuysen, Mark G Vangel, Steve Pieper, Sharon Peled, Clare M. Tempany, Hugo JWL Aerts, Ron Kikinis, Fiona M Fennessy, Andrey Fedorov

In this study we assessed the repeatability of the values of radiomics features for small prostate tumors using test-retest Multiparametric Magnetic Resonance Imaging (mpMRI) images.

Image Registration

Transfer Learning for Domain Adaptation in MRI: Application in Brain Lesion Segmentation

no code implementations25 Feb 2017 Mohsen Ghafoorian, Alireza Mehrtash, Tina Kapur, Nico Karssemeijer, Elena Marchiori, Mehran Pesteie, Charles R. G. Guttmann, Frank-Erik de Leeuw, Clare M. Tempany, Bram van Ginneken, Andriy Fedorov, Purang Abolmaesumi, Bram Platel, William M. Wells III

In this study, we aim to answer the following central questions regarding domain adaptation in medical image analysis: Given a fitted legacy model, 1) How much data from the new domain is required for a decent adaptation of the original network?

Domain Adaptation Lesion Segmentation +1

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