1 code implementation • 9 Aug 2022 • David Joon Ho, Narasimhan P. Agaram, Marc-Henri Jean, Stephanie D. Suser, Cynthia Chu, Chad M. Vanderbilt, Paul A. Meyers, Leonard H. Wexler, John H. Healey, Thomas J. Fuchs, Meera R. Hameed
Necrosis is routinely assessed post-chemotherapy from histology slides on resection specimens where necrosis ratio is defined as the ratio of necrotic tumor to overall tumor.
1 code implementation • 28 Mar 2022 • David Joon Ho, M. Herman Chui, Chad M. Vanderbilt, Jiwon Jung, Mark E. Robson, Chan-Sik Park, Jin Roh, Thomas J. Fuchs
Instead of annotating all pixels from cancer and non-cancer regions on giga-pixel whole slide images, an iterative process of annotating mislabeled regions from a segmentation model and training/finetuning the model with the additional annotation can reduce the time.
no code implementations • 2 Jul 2020 • David Joon Ho, Narasimhan P. Agaram, Peter J. Schueffler, Chad M. Vanderbilt, Marc-Henri Jean, Meera R. Hameed, Thomas J. Fuchs
Osteosarcoma is the most common malignant primary bone tumor.
no code implementations • MIDL 2019 • Chensu Xie, Hassan Muhammad, Chad M. Vanderbilt, Raul Caso, Dig Vijay Kumar Yarlagadda, Gabriele Campanella, Thomas J. Fuchs
A loss with respect to the slide label is backpropagated through an integrated CNN model to $k$ input tiles that are used to represent each part.