Search Results for author: Carlos Soto

Found 5 papers, 2 papers with code

Extracting Protein-Protein Interactions (PPIs) from Biomedical Literature using Attention-based Relational Context Information

1 code implementation8 Mar 2024 Gilchan Park, Sean McCorkle, Carlos Soto, Ian Blaby, Shinjae Yoo

On the other hand, machine learning methods to automate PPI knowledge extraction from the scientific literature have been limited by a shortage of appropriate annotated data.

Relation Relation Classification

Virtual Scientific Companion for Synchrotron Beamlines: A Prototype

no code implementations28 Dec 2023 Daniel Potemkin, Carlos Soto, Ruipeng Li, Kevin Yager, Esther Tsai

In this work, we introduce the prototype of virtual scientific companion (VISION) and demonstrate that it is possible to control basic beamline operations through natural language with open-source language model and the limited computational resources at beamline.

Language Modelling

An extensible point-based method for data chart value detection

1 code implementation22 Aug 2023 Carlos Soto, Shinjae Yoo

We present an extensible method for identifying semantic points to reverse engineer (i. e. extract the values of) data charts, particularly those in scientific articles.

object-detection Object Detection +1

Shape And Structure Preserving Differential Privacy

no code implementations21 Sep 2022 Carlos Soto, Karthik Bharath, Matthew Reimherr, Aleksandra Slavkovic

It is common for data structures such as images and shapes of 2D objects to be represented as points on a manifold.

Visual Detection with Context for Document Layout Analysis

no code implementations IJCNLP 2019 Carlos Soto, Shinjae Yoo

Due to the limited availability of high-quality region-labels for scientific articles, we also contribute a novel dataset of region annotations, the first version of which covers 9 region classes and 822 article pages.

Document Layout Analysis Literature Mining +2

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