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Found 7 papers, 3 papers with code
CESPED: a new benchmark for supervised particle pose estimation in Cryo-EM
Cryo-EM is a powerful tool for understanding macromolecular structures, yet current methods for structure reconstruction are slow and computationally demanding.
Embracing assay heterogeneity with neural processes for markedly improved bioactivity predictions
Predicting the bioactivity of a ligand is one of the hardest and most important challenges in computer-aided drug discovery.
3D pride without 2D prejudice: Bias-controlled multi-level generative models for structure-based ligand design
Generative models for structure-based molecular design hold significant promise for drug discovery, with the potential to speed up the hit-to-lead development cycle, while improving the quality of drug candidates and reducing costs.
Meaningful machine learning models and machine-learned pharmacophores from fragment screening campaigns
In this study we derive ML models from over 50 fragment-screening campaigns to introduce two important elements that we believe are absent in most -- if not all -- ML studies of this type reported to date: First, alongside the observed hits we use to train our models, we incorporate true misses and show that these experimentally validated negative data are of significant importance to the quality of the derived models.
BenchML: an extensible pipelining framework for benchmarking representations of materials and molecules at scale
We introduce a machine-learning (ML) framework for high-throughput benchmarking of diverse representations of chemical systems against datasets of materials and molecules.
Investigating 3D Atomic Environments for Enhanced QSAR
Most approaches use molecular descriptors based on a 2D representation of molecules as a graph of atoms and bonds, abstracting away the molecular shape.
Noisy, sparse, nonlinear: Navigating the Bermuda Triangle of physical inference with deep filtering
Capturing the microscopic interactions that determine molecular reactivity poses a challenge across the physical sciences.
