1 code implementation • 24 Sep 2019 • Allen Nie, Arturo L. Pineda, Matt W. Wright Hannah Wand, Bryan Wulf, Helio A. Costa, Ronak Y. Patel, Carlos D. Bustamante, James Zou
In collaboration with the Clinical Genomic Resource (ClinGen)---the flagship NIH program for clinical curation---we propose the first machine learning system, LitGen, that can retrieve papers for a particular variant and filter them by specific evidence types used by curators to assess for pathogenicity.
1 code implementation • 28 Jun 2018 • Allen Nie, Ashley Zehnder, Rodney L. Page, Arturo L. Pineda, Manuel A. Rivas, Carlos D. Bustamante, James Zou
However, clinicians lack the time and resource to annotate patient records with standard medical diagnostic codes and most veterinary visits are captured in free text notes.