no code implementations • 14 Sep 2023 • Eugene Vorontsov, Alican Bozkurt, Adam Casson, George Shaikovski, Michal Zelechowski, SiQi Liu, Kristen Severson, Eric Zimmermann, James Hall, Neil Tenenholtz, Nicolo Fusi, Philippe Mathieu, Alexander van Eck, Donghun Lee, Julian Viret, Eric Robert, Yi Kan Wang, Jeremy D. Kunz, Matthew C. H. Lee, Jan Bernhard, Ran A. Godrich, Gerard Oakley, Ewan Millar, Matthew Hanna, Juan Retamero, William A. Moye, Razik Yousfi, Christopher Kanan, David Klimstra, Brandon Rothrock, Thomas J. Fuchs
The use of artificial intelligence to enable precision medicine and decision support systems through the analysis of pathology images has the potential to revolutionize the diagnosis and treatment of cancer.
no code implementations • 3 Jan 2020 • Kivanc Kose, Alican Bozkurt, Christi Alessi-Fox, Melissa Gill, Caterina Longo, Giovanni Pellacani, Jennifer Dy, Dana H. Brooks, Milind Rajadhyaksha
We trained and tested our model on non-overlapping partitions of 117 reflectance confocal microscopy (RCM) mosaics of melanocytic lesions, an extensive dataset for this application, collected at four clinics in the US, and two in Italy.
no code implementations • 11 Nov 2019 • Alican Bozkurt, Babak Esmaeili, Jean-Baptiste Tristan, Dana H. Brooks, Jennifer G. Dy, Jan-Willem van de Meent
Variational autoencoders optimize an objective that combines a reconstruction loss (the distortion) and a KL term (the rate).
1 code implementation • 22 Dec 2018 • Alican Bozkurt, Babak Esmaeili, Dana H. Brooks, Jennifer G. Dy, Jan-Willem van de Meent
This leads to the hypothesis that, for a sufficiently high capacity encoder and decoder, the VAE decoder will perform nearest-neighbor matching according to the coordinates in the latent space.
no code implementations • 6 Apr 2018 • Babak Esmaeili, Hao Wu, Sarthak Jain, Alican Bozkurt, N. Siddharth, Brooks Paige, Dana H. Brooks, Jennifer Dy, Jan-Willem van de Meent
Deep latent-variable models learn representations of high-dimensional data in an unsupervised manner.
no code implementations • 5 Feb 2018 • Alican Bozkurt, Kivanc Kose, Christi Alessi-Fox, Melissa Gill, Dana H. Brooks, Jennifer G. Dy, Milind Rajadhyaksha
We describe a new multiresolution "nested encoder-decoder" convolutional network architecture and use it to annotate morphological patterns in reflectance confocal microscopy (RCM) images of human skin for aiding cancer diagnosis.
no code implementations • 1 Dec 2017 • Alican Bozkurt, Kivanc Kose, Jaume Coll-Font, Christi Alessi-Fox, Dana H. Brooks, Jennifer G. Dy, Milind Rajadhyaksha
Reflectance confocal microscopy (RCM) is an effective, non-invasive pre-screening tool for skin cancer diagnosis, but it requires extensive training and experience to assess accurately.
no code implementations • 9 Jul 2014 • Alican Bozkurt, Pinar Duygulu, A. Enis Cetin
Recognizing fonts has become an important task in document analysis, due to the increasing number of available digital documents in different fonts and emphases.