no code implementations • 15 Apr 2024 • Cheng Jiang, Alexander Gedeon, Yiwei Lyu, Eric Landgraf, Yufeng Zhang, Xinhai Hou, Akhil Kondepudi, Asadur Chowdury, Honglak Lee, Todd Hollon
Volumetric biomedical microscopy has the potential to increase the diagnostic information extracted from clinical tissue specimens and improve the diagnostic accuracy of both human pathologists and computational pathology models.
2 code implementations • 20 Mar 2024 • Yiwei Lyu, Sung Jik Cha, Cheng Jiang, Asadur Chowdury, Xinhai Hou, Edward Harake, Akhil Kondepudi, Christian Freudiger, Honglak Lee, Todd C. Hollon
Here, we present Restorative Step-Calibrated Diffusion (RSCD), an unpaired image restoration method that views the image restoration problem as completing the finishing steps of a diffusion-based image generation task.
no code implementations • 9 Feb 2024 • Xinhai Hou, Cheng Jiang, Akhil Kondepudi, Yiwei Lyu, Asadur Zaman Chowdury, Honglak Lee, Todd C. Hollon
Self-supervised representation learning can achieve high-quality WSI visual feature learning for downstream diagnostic tasks, such as cancer diagnosis or molecular genetic prediction.
1 code implementation • 23 Mar 2023 • Todd C. Hollon, Cheng Jiang, Asadur Chowdury, Mustafa Nasir-Moin, Akhil Kondepudi, Alexander Aabedi, Arjun Adapa, Wajd Al-Holou, Jason Heth, Oren Sagher, Pedro Lowenstein, Maria Castro, Lisa Irina Wadiura, Georg Widhalm, Volker Neuschmelting, David Reinecke, Niklas von Spreckelsen, Mitchel S. Berger, Shawn L. Hervey-Jumper, John G. Golfinos, Matija Snuderl, Sandra Camelo-Piragua, Christian Freudiger, Honglak Lee, Daniel A. Orringer
Molecular classification has transformed the management of brain tumors by enabling more accurate prognostication and personalized treatment.
no code implementations • CVPR 2023 • Cheng Jiang, Xinhai Hou, Akhil Kondepudi, Asadur Chowdury, Christian W. Freudiger, Daniel A. Orringer, Honglak Lee, Todd C. Hollon
Importantly, sampled patches from WSIs of a patient's tumor are a diverse set of image examples that capture the same underlying cancer diagnosis.
no code implementations • 16 Jun 2022 • Cheng Jiang, Asadur Chowdury, Xinhai Hou, Akhil Kondepudi, Christian W. Freudiger, Kyle Conway, Sandra Camelo-Piragua, Daniel A. Orringer, Honglak Lee, Todd C. Hollon
Here, we present OpenSRH, the first public dataset of clinical SRH images from 300+ brain tumors patients and 1300+ unique whole slide optical images.
no code implementations • 8 Aug 2021 • Cheng Jiang, Abhishek Bhattacharya, Joseph Linzey, Rushikesh S. Joshi, Sung Jik Cha, Sudharsan Srinivasan, Daniel Alber, Akhil Kondepudi, Esteban Urias, Balaji Pandian, Wajd Al-Holou, Steve Sullivan, B. Gregory Thompson, Jason Heth, Chris Freudiger, Siri Khalsa, Donato Pacione, John G. Golfinos, Sandra Camelo-Piragua, Daniel A. Orringer, Honglak Lee, Todd Hollon
Conclusion: SRH with trained artificial intelligence models can provide rapid and accurate intraoperative analysis of skull base tumor specimens to inform surgical decision-making.