Epidemiology

70 papers with code • 0 benchmarks • 1 datasets

Epidemiology is a scientific discipline that provides reliable knowledge for clinical medicine focusing on prevention, diagnosis and treatment of diseases. Research in Epidemiology aims at characterizing risk factors for the outbreak of diseases and at evaluating the efficiency of certain treatment strategies, e.g., to compare a new treatment with an established gold standard. This research is strongly hypothesis-driven and statistical analysis is the major tool for epidemiologists so far. Correlations between genetic factors, environmental factors, life style-related parameters, age and diseases are analyzed.

Source: Visual Analytics of Image-Centric Cohort Studies in Epidemiology

Datasets


All-in-one simulation-based inference

mackelab/simformer 15 Apr 2024

Amortized Bayesian inference trains neural networks to solve stochastic inference problems using model simulations, thereby making it possible to rapidly perform Bayesian inference for any newly observed data.

9
15 Apr 2024

A Review of Graph Neural Networks in Epidemic Modeling

emory-melody/awesome-epidemic-modeling-papers 28 Mar 2024

In this paper, we endeavor to furnish a comprehensive review of GNNs in epidemic tasks and highlight potential future directions.

11
28 Mar 2024

Forecasting and predicting stochastic agent-based model data with biologically-informed neural networks

johnnardini/forecasting_predicting_abms 8 Nov 2023

In this work, we describe how biologically-informed neural networks (BINNs) can be trained to learn BINN-guided PDE models to predict ABM behavior.

0
08 Nov 2023

Learning and Generalizing Polynomials in Simulation Metamodeling

jesperhauch/polynomial_deep_learning 20 Jul 2023

The ability to learn polynomials and generalize out-of-distribution is essential for simulation metamodels in many disciplines of engineering, where the time step updates are described by polynomials.

1
20 Jul 2023

Amortized Simulation-Based Frequentist Inference for Tractable and Intractable Likelihoods

AliAlkadhim/ALFFI 13 Jun 2023

The utility of our algorithm is illustrated by applying it to three pedagogically interesting examples: the first is from cosmology, the second from high-energy physics and astronomy, both with tractable likelihoods, while the third, with an intractable likelihood, is from epidemiology.

0
13 Jun 2023

Under-Counted Tensor Completion with Neural Incorporation of Attributes

shahanaibrahimosu/undercounted-tensor-completion 5 Jun 2023

Systematic under-counting effects are observed in data collected across many disciplines, e. g., epidemiology and ecology.

1
05 Jun 2023

Parity Calibration

youngseogchung/parity-calibration 29 May 2023

In a sequential regression setting, a decision-maker may be primarily concerned with whether the future observation will increase or decrease compared to the current one, rather than the actual value of the future observation.

0
29 May 2023

BAND: Biomedical Alert News Dataset

fuzihaofzh/band 23 May 2023

Infectious disease outbreaks continue to pose a significant threat to human health and well-being.

0
23 May 2023

Spatio-temporal Diffusion Point Processes

facebookresearch/neural_stpp 21 May 2023

To enhance the learning of each step, an elaborated spatio-temporal co-attention module is proposed to capture the interdependence between the event time and space adaptively.

93
21 May 2023

Using Geographic Location-based Public Health Features in Survival Analysis

SmarTreatMate/SmarTreatMate.github.io 16 Apr 2023

Time elapsed till an event of interest is often modeled using the survival analysis methodology, which estimates a survival score based on the input features.

0
16 Apr 2023