A Synchronized Layer-by-layer Growing Approach for Plausible Neuronal Morphology Generation
Neuronal morphology is essential for studying brain functioning and understanding neurodegenerative disorders. As the acquiring of real-world morphology data is expensive, computational approaches especially learning-based ones e.g. MorphVAE for morphology generation were recently studied, which are often conducted in a way of randomly augmenting a given authentic morphology to achieve plausibility. Under such a setting, this paper proposes \textbf{MorphGrower} which aims to generate more plausible morphology samples by mimicking the natural growth mechanism instead of a one-shot treatment as done in MorphVAE. Specifically, MorphGrower generates morphologies layer by layer synchronously and chooses a pair of sibling branches as the basic generation block, and the generation of each layer is conditioned on the morphological structure of previous layers and then generate morphologies via a conditional variational autoencoder with spherical latent space. Extensive experimental results on four real-world datasets demonstrate that MorphGrower outperforms MorphVAE by a notable margin. Our code will be publicly available to facilitate future research.
PDF Abstract